Automated design of genomic Southern blot probes
Mike DR Croning, David G Fricker, Noboru H Komiyama and Seth GN Grant
Design Case - ProbeDesign45 - back to list
Summary
./analyse_probe_search_results : Wed Sep 14 17:06:37 2005
Connected to host: host, as user: user Database : southern_blot_designs Fetched probe design: ProbeDesign45 assembly : NCBIM34 bias : 3prime chromosome : 17 id : 27 strand : 1 ------------- Design window length: 3001bp All jobs for probe design are successful - total: 46 Fetched conf : Exonerate mouse_NCBIM34 (id: 1) Genome file(s) at: /blastdb/Mouse/NCBIM34/softmasked_dusted Fetched 907 putative probes to analyse Selection criteria to rank probes: Minimum score ratio : 10 (i.e. self-hit must score at least 10 times higher than the next best hit) Maximum percent repetitive bases: 5 Favour probes to the 3prime end of design window ------------------------ Putative probes without hits : 0 Putative probes with single_self_hit : 907/907 Putative probes exceeding selection criteria: 355/907 PASSED (GREEN) AND FAILED PUTATIVE PROBES IN THE DESIGN WINDOW --------------------------------------------------------------
Image
Unique (yellow), passed (green) and failed putative probes in the design window
Unique putative probes
No probes
Putative probes
Putative probe ID | Length | Score ratio | Actual | %rep DNA | Distance | Overall |
---|---|---|---|---|---|---|
29161 | 1050 | 29.0 | 5250 | 0.3 | 1144 | 28.4 |
29200 | 1000 | 27.6 | 5000 | - | 1150 | 27.6 |
29201 | 1000 | 27.6 | 5000 | 0.2 | 1200 | 27.2 |
29391 | 800 | 26.5 | 4000 | - | 1200 | 26.5 |
29243 | 950 | 26.2 | 4750 | - | 1175 | 26.2 |
29244 | 950 | 26.2 | 4750 | - | 1222 | 26.2 |
29288 | 900 | 24.9 | 4500 | - | 1170 | 24.9 |
29289 | 900 | 24.9 | 4500 | - | 1215 | 24.9 |
29290 | 900 | 24.9 | 4500 | - | 1260 | 24.9 |
29450 | 750 | 24.8 | 3750 | - | 1221 | 24.8 |
29337 | 850 | 24.6 | 4250 | - | 1176 | 24.6 |
29392 | 800 | 23.7 | 4000 | - | 1240 | 23.7 |
29338 | 850 | 23.5 | 4250 | - | 1218 | 23.5 |
29339 | 850 | 23.5 | 4250 | - | 1260 | 23.5 |
29340 | 850 | 23.5 | 4250 | - | 1302 | 23.5 |
29341 | 850 | 23.5 | 4250 | - | 1344 | 23.5 |
29291 | 900 | 24.9 | 4500 | 0.8 | 1305 | 23.3 |
29390 | 800 | 23.1 | 4000 | - | 1160 | 23.1 |
29002 | 1300 | 26.5 | 6500 | 2.0 | 1170 | 22.5 |
29003 | 1300 | 26.5 | 6500 | 2.0 | 1235 | 22.5 |
29004 | 1300 | 26.5 | 6500 | 2.0 | 1300 | 22.5 |
29005 | 1300 | 26.5 | 6500 | 2.0 | 1365 | 22.5 |
29006 | 1300 | 26.5 | 6500 | 2.0 | 1430 | 22.5 |
29007 | 1300 | 26.5 | 6500 | 2.0 | 1495 | 22.5 |
29008 | 1300 | 26.5 | 6500 | 2.0 | 1560 | 22.5 |
29009 | 1300 | 26.5 | 6500 | 2.0 | 1625 | 22.5 |
29010 | 1300 | 26.5 | 6500 | 2.0 | 1690 | 22.5 |
29242 | 950 | 26.2 | 4750 | 2.0 | 1128 | 22.2 |
29452 | 750 | 22.2 | 3750 | - | 1295 | 22.2 |
29393 | 800 | 22.1 | 4000 | - | 1280 | 22.1 |
29394 | 800 | 22.1 | 4000 | - | 1320 | 22.1 |
29395 | 800 | 22.1 | 4000 | - | 1360 | 22.1 |
29512 | 700 | 21.7 | 3500 | - | 1190 | 21.7 |
29448 | 750 | 21.7 | 3750 | - | 1147 | 21.7 |
29449 | 750 | 21.7 | 3750 | - | 1184 | 21.7 |
29396 | 800 | 22.1 | 4000 | 0.2 | 1400 | 21.6 |
29582 | 650 | 21.5 | 3250 | - | 1216 | 21.5 |
29336 | 850 | 24.6 | 4250 | 1.5 | 1134 | 21.5 |
29124 | 1100 | 30.4 | 5500 | 4.5 | 1100 | 21.5 |
29033 | 1250 | 25.5 | 6250 | 2.1 | 1364 | 21.4 |
29034 | 1250 | 25.5 | 6250 | 2.1 | 1426 | 21.4 |
29035 | 1250 | 25.5 | 6250 | 2.1 | 1488 | 21.4 |
29036 | 1250 | 25.5 | 6250 | 2.1 | 1550 | 21.4 |
29037 | 1250 | 25.5 | 6250 | 2.1 | 1612 | 21.4 |
29287 | 900 | 26.0 | 4500 | 2.4 | 1125 | 21.1 |
29453 | 750 | 20.7 | 3750 | - | 1332 | 20.7 |
29454 | 750 | 20.7 | 3750 | - | 1369 | 20.7 |
29455 | 750 | 20.7 | 3750 | - | 1406 | 20.7 |
29456 | 750 | 20.7 | 3750 | - | 1443 | 20.7 |
29221 | 950 | 28.4 | 4750 | 3.9 | 141 | 20.7 |
29511 | 700 | 20.2 | 3500 | - | 1155 | 20.2 |
29070 | 1200 | 24.5 | 6000 | 2.2 | 1800 | 20.2 |
29658 | 600 | 19.9 | 3000 | - | 1200 | 19.9 |
29104 | 1100 | 27.9 | 5500 | 4.2 | 0 | 19.6 |
29517 | 700 | 19.3 | 3500 | - | 1365 | 19.3 |
29518 | 700 | 19.3 | 3500 | - | 1400 | 19.3 |
29519 | 700 | 19.3 | 3500 | - | 1435 | 19.3 |
29520 | 700 | 19.3 | 3500 | - | 1470 | 19.3 |
29125 | 1100 | 23.8 | 5500 | 2.4 | 1155 | 19.1 |
29059 | 1200 | 24.5 | 6000 | 2.8 | 1140 | 19.0 |
29580 | 650 | 18.8 | 3250 | - | 1152 | 18.8 |
29581 | 650 | 18.8 | 3250 | - | 1184 | 18.8 |
29744 | 550 | 18.2 | 2750 | - | 1215 | 18.2 |
29588 | 650 | 18.0 | 3250 | - | 1408 | 18.0 |
29589 | 650 | 18.0 | 3250 | - | 1440 | 18.0 |
29590 | 650 | 18.0 | 3250 | - | 1472 | 18.0 |
29591 | 650 | 18.0 | 3250 | - | 1504 | 18.0 |
29592 | 650 | 18.0 | 3250 | - | 1536 | 18.0 |
29666 | 600 | 17.8 | 3000 | - | 1440 | 17.8 |
29091 | 1150 | 23.5 | 5750 | 2.9 | 1140 | 17.7 |
29754 | 550 | 17.4 | 2750 | - | 1485 | 17.4 |
29657 | 600 | 17.3 | 3000 | - | 1170 | 17.3 |
29521 | 700 | 19.3 | 3500 | 1.0 | 1505 | 17.3 |
29743 | 550 | 16.9 | 2750 | - | 1188 | 16.9 |
29667 | 600 | 16.6 | 3000 | - | 1470 | 16.6 |
29668 | 600 | 16.6 | 3000 | - | 1500 | 16.6 |
29669 | 600 | 16.6 | 3000 | - | 1530 | 16.6 |
29670 | 600 | 16.6 | 3000 | - | 1560 | 16.6 |
29671 | 600 | 16.6 | 3000 | - | 1590 | 16.6 |
29838 | 500 | 16.6 | 2500 | - | 1200 | 16.6 |
29140 | 1050 | 25.6 | 5250 | 4.6 | 52 | 16.5 |
29029 | 1250 | 25.5 | 6250 | 4.6 | 1116 | 16.4 |
29389 | 800 | 23.1 | 4000 | 3.4 | 1120 | 16.4 |
29742 | 550 | 15.9 | 2750 | - | 1161 | 15.9 |
29755 | 550 | 15.2 | 2750 | - | 1512 | 15.2 |
29756 | 550 | 15.2 | 2750 | - | 1539 | 15.2 |
29757 | 550 | 15.2 | 2750 | - | 1566 | 15.2 |
29758 | 550 | 15.2 | 2750 | - | 1593 | 15.2 |
29759 | 550 | 15.2 | 2750 | - | 1620 | 15.2 |
29760 | 550 | 15.2 | 2750 | - | 1647 | 15.2 |
29656 | 600 | 17.3 | 3000 | 1.2 | 1140 | 15.0 |
29852 | 500 | 14.7 | 2500 | - | 1550 | 14.7 |
29836 | 500 | 14.5 | 2500 | - | 1150 | 14.5 |
29837 | 500 | 14.5 | 2500 | - | 1175 | 14.5 |
29853 | 500 | 13.8 | 2500 | - | 1575 | 13.8 |
29854 | 500 | 13.8 | 2500 | - | 1600 | 13.8 |
29855 | 500 | 13.8 | 2500 | - | 1625 | 13.8 |
29856 | 500 | 13.8 | 2500 | - | 1650 | 13.8 |
29857 | 500 | 13.8 | 2500 | - | 1675 | 13.8 |
29858 | 500 | 13.8 | 2500 | 0.4 | 1700 | 13.0 |
29510 | 700 | 20.2 | 3500 | 3.9 | 1120 | 12.5 |
29781 | 550 | 16.1 | 2750 | 1.8 | 2214 | 12.4 |
29741 | 550 | 15.9 | 2750 | 2.4 | 1134 | 11.2 |
29579 | 650 | 18.8 | 3250 | 4.2 | 1120 | 10.5 |
29835 | 500 | 14.5 | 2500 | 4.4 | 1125 | 5.7 |
Overall score = score_ratio - 2 * repetitive DNA content
Redundant probes
Putative probe ID | Length | Score ratio | Actual | %rep DNA | Distance | Overall |
---|---|---|---|---|---|---|
29245 | 950 | 26.2 | 4750 | 2.2 | 1269 | 21.8 |
29030 | 1250 | 25.5 | 6250 | 2.1 | 1178 | 21.4 |
29031 | 1250 | 25.5 | 6250 | 2.1 | 1240 | 21.4 |
29032 | 1250 | 25.5 | 6250 | 2.1 | 1302 | 21.4 |
29038 | 1250 | 25.5 | 6250 | 2.1 | 1674 | 21.4 |
29039 | 1250 | 25.5 | 6250 | 2.1 | 1736 | 21.4 |
29162 | 1050 | 25.1 | 5250 | 2.5 | 1196 | 20.2 |
29060 | 1200 | 24.5 | 6000 | 2.2 | 1200 | 20.2 |
29061 | 1200 | 24.5 | 6000 | 2.2 | 1260 | 20.2 |
29062 | 1200 | 24.5 | 6000 | 2.2 | 1320 | 20.2 |
29063 | 1200 | 24.5 | 6000 | 2.2 | 1380 | 20.2 |
29064 | 1200 | 24.5 | 6000 | 2.2 | 1440 | 20.2 |
29065 | 1200 | 24.5 | 6000 | 2.2 | 1500 | 20.2 |
29066 | 1200 | 24.5 | 6000 | 2.2 | 1560 | 20.2 |
29067 | 1200 | 24.5 | 6000 | 2.2 | 1620 | 20.2 |
29068 | 1200 | 24.5 | 6000 | 2.2 | 1680 | 20.2 |
29069 | 1200 | 24.5 | 6000 | 2.2 | 1740 | 20.2 |
29092 | 1150 | 23.5 | 5750 | 2.3 | 1197 | 18.9 |
29093 | 1150 | 23.5 | 5750 | 2.3 | 1254 | 18.9 |
29094 | 1150 | 23.5 | 5750 | 2.3 | 1311 | 18.9 |
29095 | 1150 | 23.5 | 5750 | 2.3 | 1368 | 18.9 |
29096 | 1150 | 23.5 | 5750 | 2.3 | 1425 | 18.9 |
29097 | 1150 | 23.5 | 5750 | 2.3 | 1482 | 18.9 |
29098 | 1150 | 23.5 | 5750 | 2.3 | 1539 | 18.9 |
29099 | 1150 | 23.5 | 5750 | 2.3 | 1596 | 18.9 |
29100 | 1150 | 23.5 | 5750 | 2.3 | 1653 | 18.9 |
29101 | 1150 | 23.5 | 5750 | 2.3 | 1710 | 18.9 |
29102 | 1150 | 23.5 | 5750 | 2.3 | 1767 | 18.9 |
29103 | 1150 | 23.5 | 5750 | 2.3 | 1824 | 18.9 |
29199 | 1000 | 27.6 | 5000 | 4.7 | 1100 | 18.2 |
29202 | 1000 | 23.3 | 5000 | 2.6 | 1250 | 18.1 |
29126 | 1100 | 22.4 | 5500 | 2.4 | 1210 | 17.7 |
29127 | 1100 | 22.4 | 5500 | 2.4 | 1265 | 17.7 |
29128 | 1100 | 22.4 | 5500 | 2.4 | 1320 | 17.7 |
29129 | 1100 | 22.4 | 5500 | 2.4 | 1375 | 17.7 |
29130 | 1100 | 22.4 | 5500 | 2.4 | 1430 | 17.7 |
29131 | 1100 | 22.4 | 5500 | 2.4 | 1485 | 17.7 |
29132 | 1100 | 22.4 | 5500 | 2.4 | 1540 | 17.7 |
29133 | 1100 | 22.4 | 5500 | 2.4 | 1595 | 17.7 |
29134 | 1100 | 22.4 | 5500 | 2.4 | 1650 | 17.7 |
29135 | 1100 | 22.4 | 5500 | 2.4 | 1705 | 17.7 |
29136 | 1100 | 22.4 | 5500 | 2.4 | 1760 | 17.7 |
29137 | 1100 | 22.4 | 5500 | 2.4 | 1815 | 17.7 |
29138 | 1100 | 22.4 | 5500 | 2.4 | 1870 | 17.7 |
29163 | 1050 | 21.4 | 5250 | 2.5 | 1248 | 16.5 |
29164 | 1050 | 21.4 | 5250 | 2.5 | 1300 | 16.5 |
29165 | 1050 | 21.4 | 5250 | 2.5 | 1352 | 16.5 |
29166 | 1050 | 21.4 | 5250 | 2.5 | 1404 | 16.5 |
29167 | 1050 | 21.4 | 5250 | 2.5 | 1456 | 16.5 |
29168 | 1050 | 21.4 | 5250 | 2.5 | 1508 | 16.5 |
29169 | 1050 | 21.4 | 5250 | 2.5 | 1560 | 16.5 |
29170 | 1050 | 21.4 | 5250 | 2.5 | 1612 | 16.5 |
29171 | 1050 | 21.4 | 5250 | 2.5 | 1664 | 16.5 |
29172 | 1050 | 21.4 | 5250 | 2.5 | 1716 | 16.5 |
29173 | 1050 | 21.4 | 5250 | 2.5 | 1768 | 16.5 |
29174 | 1050 | 21.4 | 5250 | 2.5 | 1820 | 16.5 |
29175 | 1050 | 21.4 | 5250 | 2.5 | 1872 | 16.5 |
29176 | 1050 | 21.4 | 5250 | 2.5 | 1924 | 16.5 |
29179 | 1000 | 25.4 | 5000 | 4.6 | 100 | 16.2 |
29342 | 850 | 21.7 | 4250 | 3.1 | 1386 | 15.6 |
29203 | 1000 | 20.4 | 5000 | 2.6 | 1300 | 15.2 |
29204 | 1000 | 20.4 | 5000 | 2.6 | 1350 | 15.2 |
29205 | 1000 | 20.4 | 5000 | 2.6 | 1400 | 15.2 |
29206 | 1000 | 20.4 | 5000 | 2.6 | 1450 | 15.2 |
29207 | 1000 | 20.4 | 5000 | 2.6 | 1500 | 15.2 |
29208 | 1000 | 20.4 | 5000 | 2.6 | 1550 | 15.2 |
29209 | 1000 | 20.4 | 5000 | 2.6 | 1600 | 15.2 |
29210 | 1000 | 20.4 | 5000 | 2.6 | 1650 | 15.2 |
29211 | 1000 | 20.4 | 5000 | 2.6 | 1700 | 15.2 |
29212 | 1000 | 20.4 | 5000 | 2.6 | 1750 | 15.2 |
29213 | 1000 | 20.4 | 5000 | 2.6 | 1800 | 15.2 |
29214 | 1000 | 20.4 | 5000 | 2.6 | 1850 | 15.2 |
29215 | 1000 | 20.4 | 5000 | 2.6 | 1900 | 15.2 |
29216 | 1000 | 20.4 | 5000 | 2.6 | 1950 | 15.2 |
29217 | 1000 | 20.4 | 5000 | 2.6 | 2000 | 15.2 |
29292 | 900 | 20.9 | 4500 | 2.9 | 1350 | 15.2 |
29489 | 700 | 23.3 | 3500 | 4.4 | 385 | 14.5 |
29246 | 950 | 19.4 | 4750 | 2.7 | 1316 | 13.9 |
29247 | 950 | 19.4 | 4750 | 2.7 | 1363 | 13.9 |
29248 | 950 | 19.4 | 4750 | 2.7 | 1410 | 13.9 |
29249 | 950 | 19.4 | 4750 | 2.7 | 1457 | 13.9 |
29250 | 950 | 19.4 | 4750 | 2.7 | 1504 | 13.9 |
29251 | 950 | 19.4 | 4750 | 2.7 | 1551 | 13.9 |
29252 | 950 | 19.4 | 4750 | 2.7 | 1598 | 13.9 |
29253 | 950 | 19.4 | 4750 | 2.7 | 1645 | 13.9 |
29254 | 950 | 19.4 | 4750 | 2.7 | 1692 | 13.9 |
29255 | 950 | 19.4 | 4750 | 2.7 | 1739 | 13.9 |
29256 | 950 | 19.4 | 4750 | 2.7 | 1786 | 13.9 |
29257 | 950 | 19.4 | 4750 | 2.7 | 1833 | 13.9 |
29258 | 950 | 19.4 | 4750 | 2.7 | 1880 | 13.9 |
29259 | 950 | 19.4 | 4750 | 2.7 | 1927 | 13.9 |
29260 | 950 | 19.4 | 4750 | 2.7 | 1974 | 13.9 |
29261 | 950 | 19.4 | 4750 | 2.7 | 2021 | 13.9 |
29397 | 800 | 19.9 | 4000 | 3.2 | 1440 | 13.4 |
29457 | 750 | 19.5 | 3750 | 3.5 | 1480 | 12.6 |
29293 | 900 | 18.4 | 4500 | 2.9 | 1395 | 12.6 |
29294 | 900 | 18.4 | 4500 | 2.9 | 1440 | 12.6 |
29295 | 900 | 18.4 | 4500 | 2.9 | 1485 | 12.6 |
29296 | 900 | 18.4 | 4500 | 2.9 | 1530 | 12.6 |
29297 | 900 | 18.4 | 4500 | 2.9 | 1575 | 12.6 |
29298 | 900 | 18.4 | 4500 | 2.9 | 1620 | 12.6 |
29299 | 900 | 18.4 | 4500 | 2.9 | 1665 | 12.6 |
29300 | 900 | 18.4 | 4500 | 2.9 | 1710 | 12.6 |
29301 | 900 | 18.4 | 4500 | 2.9 | 1755 | 12.6 |
29302 | 900 | 18.4 | 4500 | 2.9 | 1800 | 12.6 |
29303 | 900 | 18.4 | 4500 | 2.9 | 1845 | 12.6 |
29304 | 900 | 18.4 | 4500 | 2.9 | 1890 | 12.6 |
29305 | 900 | 18.4 | 4500 | 2.9 | 1935 | 12.6 |
29306 | 900 | 18.4 | 4500 | 2.9 | 1980 | 12.6 |
29307 | 900 | 18.4 | 4500 | 2.9 | 2025 | 12.6 |
29308 | 900 | 18.4 | 4500 | 2.9 | 2070 | 12.6 |
29613 | 650 | 16.9 | 3250 | 2.5 | 2208 | 12.0 |
29447 | 750 | 21.7 | 3750 | 4.9 | 1110 | 11.8 |
29593 | 650 | 18.0 | 3250 | 3.1 | 1568 | 11.8 |
29541 | 700 | 16.9 | 3500 | 2.7 | 2205 | 11.5 |
29343 | 850 | 17.3 | 4250 | 3.1 | 1428 | 11.2 |
29344 | 850 | 17.3 | 4250 | 3.1 | 1470 | 11.2 |
29345 | 850 | 17.3 | 4250 | 3.1 | 1512 | 11.2 |
29346 | 850 | 17.3 | 4250 | 3.1 | 1554 | 11.2 |
29347 | 850 | 17.3 | 4250 | 3.1 | 1596 | 11.2 |
29348 | 850 | 17.3 | 4250 | 3.1 | 1638 | 11.2 |
29349 | 850 | 17.3 | 4250 | 3.1 | 1680 | 11.2 |
29350 | 850 | 17.3 | 4250 | 3.1 | 1722 | 11.2 |
29351 | 850 | 17.3 | 4250 | 3.1 | 1764 | 11.2 |
29352 | 850 | 17.3 | 4250 | 3.1 | 1806 | 11.2 |
29353 | 850 | 17.3 | 4250 | 3.1 | 1848 | 11.2 |
29354 | 850 | 17.3 | 4250 | 3.1 | 1890 | 11.2 |
29355 | 850 | 17.3 | 4250 | 3.1 | 1932 | 11.2 |
29356 | 850 | 17.3 | 4250 | 3.1 | 1974 | 11.2 |
29357 | 850 | 17.3 | 4250 | 3.1 | 2016 | 11.2 |
29358 | 850 | 17.3 | 4250 | 3.1 | 2058 | 11.2 |
29359 | 850 | 17.3 | 4250 | 3.1 | 2100 | 11.2 |
29360 | 850 | 17.3 | 4250 | 3.1 | 2142 | 11.2 |
29416 | 800 | 17.0 | 4000 | 3.0 | 2200 | 11.0 |
29522 | 700 | 17.4 | 3500 | 3.7 | 1540 | 10.0 |
29398 | 800 | 16.3 | 4000 | 3.2 | 1480 | 9.8 |
29399 | 800 | 16.3 | 4000 | 3.2 | 1520 | 9.8 |
29400 | 800 | 16.3 | 4000 | 3.2 | 1560 | 9.8 |
29401 | 800 | 16.3 | 4000 | 3.2 | 1600 | 9.8 |
29402 | 800 | 16.3 | 4000 | 3.2 | 1640 | 9.8 |
29403 | 800 | 16.3 | 4000 | 3.2 | 1680 | 9.8 |
29404 | 800 | 16.3 | 4000 | 3.2 | 1720 | 9.8 |
29405 | 800 | 16.3 | 4000 | 3.2 | 1760 | 9.8 |
29406 | 800 | 16.3 | 4000 | 3.2 | 1800 | 9.8 |
29407 | 800 | 16.3 | 4000 | 3.2 | 1840 | 9.8 |
29408 | 800 | 16.3 | 4000 | 3.2 | 1880 | 9.8 |
29409 | 800 | 16.3 | 4000 | 3.2 | 1920 | 9.8 |
29410 | 800 | 16.3 | 4000 | 3.2 | 1960 | 9.8 |
29411 | 800 | 16.3 | 4000 | 3.2 | 2000 | 9.8 |
29412 | 800 | 16.3 | 4000 | 3.2 | 2040 | 9.8 |
29413 | 800 | 16.3 | 4000 | 3.2 | 2080 | 9.8 |
29414 | 800 | 16.3 | 4000 | 3.2 | 2120 | 9.8 |
29415 | 800 | 16.3 | 4000 | 3.2 | 2160 | 9.8 |
29672 | 600 | 16.6 | 3000 | 3.7 | 1620 | 9.2 |
29458 | 750 | 15.3 | 3750 | 3.5 | 1517 | 8.4 |
29459 | 750 | 15.3 | 3750 | 3.5 | 1554 | 8.4 |
29460 | 750 | 15.3 | 3750 | 3.5 | 1591 | 8.4 |
29461 | 750 | 15.3 | 3750 | 3.5 | 1628 | 8.4 |
29462 | 750 | 15.3 | 3750 | 3.5 | 1665 | 8.4 |
29463 | 750 | 15.3 | 3750 | 3.5 | 1702 | 8.4 |
29464 | 750 | 15.3 | 3750 | 3.5 | 1739 | 8.4 |
29465 | 750 | 15.3 | 3750 | 3.5 | 1776 | 8.4 |
29466 | 750 | 15.3 | 3750 | 3.5 | 1813 | 8.4 |
29467 | 750 | 15.3 | 3750 | 3.5 | 1850 | 8.4 |
29468 | 750 | 15.3 | 3750 | 3.5 | 1887 | 8.4 |
29469 | 750 | 15.3 | 3750 | 3.5 | 1924 | 8.4 |
29470 | 750 | 15.3 | 3750 | 3.5 | 1961 | 8.4 |
29471 | 750 | 15.3 | 3750 | 3.5 | 1998 | 8.4 |
29472 | 750 | 15.3 | 3750 | 3.5 | 2035 | 8.4 |
29473 | 750 | 15.3 | 3750 | 3.5 | 2072 | 8.4 |
29474 | 750 | 15.3 | 3750 | 3.5 | 2109 | 8.4 |
29475 | 750 | 15.3 | 3750 | 3.5 | 2146 | 8.4 |
29476 | 750 | 15.3 | 3750 | 3.5 | 2183 | 8.4 |
29594 | 650 | 15.1 | 3250 | 4.0 | 1600 | 7.1 |
29523 | 700 | 14.3 | 3500 | 3.7 | 1575 | 6.9 |
29524 | 700 | 14.3 | 3500 | 3.7 | 1610 | 6.9 |
29525 | 700 | 14.3 | 3500 | 3.7 | 1645 | 6.9 |
29526 | 700 | 14.3 | 3500 | 3.7 | 1680 | 6.9 |
29527 | 700 | 14.3 | 3500 | 3.7 | 1715 | 6.9 |
29528 | 700 | 14.3 | 3500 | 3.7 | 1750 | 6.9 |
29529 | 700 | 14.3 | 3500 | 3.7 | 1785 | 6.9 |
29530 | 700 | 14.3 | 3500 | 3.7 | 1820 | 6.9 |
29531 | 700 | 14.3 | 3500 | 3.7 | 1855 | 6.9 |
29532 | 700 | 14.3 | 3500 | 3.7 | 1890 | 6.9 |
29533 | 700 | 14.3 | 3500 | 3.7 | 1925 | 6.9 |
29534 | 700 | 14.3 | 3500 | 3.7 | 1960 | 6.9 |
29535 | 700 | 14.3 | 3500 | 3.7 | 1995 | 6.9 |
29536 | 700 | 14.3 | 3500 | 3.7 | 2030 | 6.9 |
29537 | 700 | 14.3 | 3500 | 3.7 | 2065 | 6.9 |
29538 | 700 | 14.3 | 3500 | 3.7 | 2100 | 6.9 |
29539 | 700 | 14.3 | 3500 | 3.7 | 2135 | 6.9 |
29540 | 700 | 14.3 | 3500 | 3.7 | 2170 | 6.9 |
29673 | 600 | 14.0 | 3000 | 4.3 | 1650 | 5.3 |
29595 | 650 | 13.3 | 3250 | 4.0 | 1632 | 5.3 |
29596 | 650 | 13.3 | 3250 | 4.0 | 1664 | 5.3 |
29597 | 650 | 13.3 | 3250 | 4.0 | 1696 | 5.3 |
29598 | 650 | 13.3 | 3250 | 4.0 | 1728 | 5.3 |
29599 | 650 | 13.3 | 3250 | 4.0 | 1760 | 5.3 |
29600 | 650 | 13.3 | 3250 | 4.0 | 1792 | 5.3 |
29601 | 650 | 13.3 | 3250 | 4.0 | 1824 | 5.3 |
29602 | 650 | 13.3 | 3250 | 4.0 | 1856 | 5.3 |
29603 | 650 | 13.3 | 3250 | 4.0 | 1888 | 5.3 |
29604 | 650 | 13.3 | 3250 | 4.0 | 1920 | 5.3 |
29605 | 650 | 13.3 | 3250 | 4.0 | 1952 | 5.3 |
29606 | 650 | 13.3 | 3250 | 4.0 | 1984 | 5.3 |
29607 | 650 | 13.3 | 3250 | 4.0 | 2016 | 5.3 |
29608 | 650 | 13.3 | 3250 | 4.0 | 2048 | 5.3 |
29609 | 650 | 13.3 | 3250 | 4.0 | 2080 | 5.3 |
29610 | 650 | 13.3 | 3250 | 4.0 | 2112 | 5.3 |
29611 | 650 | 13.3 | 3250 | 4.0 | 2144 | 5.3 |
29612 | 650 | 13.3 | 3250 | 4.0 | 2176 | 5.3 |
29761 | 550 | 14.5 | 2750 | 4.7 | 1674 | 5.0 |
29674 | 600 | 12.2 | 3000 | 4.3 | 1680 | 3.6 |
29675 | 600 | 12.2 | 3000 | 4.3 | 1710 | 3.6 |
29676 | 600 | 12.2 | 3000 | 4.3 | 1740 | 3.6 |
29677 | 600 | 12.2 | 3000 | 4.3 | 1770 | 3.6 |
29678 | 600 | 12.2 | 3000 | 4.3 | 1800 | 3.6 |
29679 | 600 | 12.2 | 3000 | 4.3 | 1830 | 3.6 |
29680 | 600 | 12.2 | 3000 | 4.3 | 1860 | 3.6 |
29681 | 600 | 12.2 | 3000 | 4.3 | 1890 | 3.6 |
29682 | 600 | 12.2 | 3000 | 4.3 | 1920 | 3.6 |
29683 | 600 | 12.2 | 3000 | 4.3 | 1950 | 3.6 |
29684 | 600 | 12.2 | 3000 | 4.3 | 1980 | 3.6 |
29685 | 600 | 12.2 | 3000 | 4.3 | 2010 | 3.6 |
29686 | 600 | 12.2 | 3000 | 4.3 | 2040 | 3.6 |
29687 | 600 | 12.2 | 3000 | 4.3 | 2070 | 3.6 |
29688 | 600 | 12.2 | 3000 | 4.3 | 2100 | 3.6 |
29689 | 600 | 12.2 | 3000 | 4.3 | 2130 | 3.6 |
29690 | 600 | 12.2 | 3000 | 4.3 | 2160 | 3.6 |
29691 | 600 | 12.2 | 3000 | 4.3 | 2190 | 3.6 |
29762 | 550 | 12.5 | 2750 | 4.7 | 1701 | 3.0 |
29763 | 550 | 11.2 | 2750 | 4.7 | 1728 | 1.8 |
29764 | 550 | 11.2 | 2750 | 4.7 | 1755 | 1.8 |
29765 | 550 | 11.2 | 2750 | 4.7 | 1782 | 1.8 |
29766 | 550 | 11.2 | 2750 | 4.7 | 1809 | 1.8 |
29767 | 550 | 11.2 | 2750 | 4.7 | 1836 | 1.8 |
29768 | 550 | 11.2 | 2750 | 4.7 | 1863 | 1.8 |
29769 | 550 | 11.2 | 2750 | 4.7 | 1890 | 1.8 |
29770 | 550 | 11.2 | 2750 | 4.7 | 1917 | 1.8 |
29771 | 550 | 11.2 | 2750 | 4.7 | 1944 | 1.8 |
29772 | 550 | 11.2 | 2750 | 4.7 | 1971 | 1.8 |
29773 | 550 | 11.2 | 2750 | 4.7 | 1998 | 1.8 |
29774 | 550 | 11.2 | 2750 | 4.7 | 2025 | 1.8 |
29775 | 550 | 11.2 | 2750 | 4.7 | 2052 | 1.8 |
29776 | 550 | 11.2 | 2750 | 4.7 | 2079 | 1.8 |
29777 | 550 | 11.2 | 2750 | 4.7 | 2106 | 1.8 |
29778 | 550 | 11.2 | 2750 | 4.7 | 2133 | 1.8 |
29779 | 550 | 11.2 | 2750 | 4.7 | 2160 | 1.8 |
29780 | 550 | 11.2 | 2750 | 4.7 | 2187 | 1.8 |
29878 | 500 | 10.6 | 2500 | 4.8 | 2200 | 1.0 |
Overall score = score_ratio - 2 * repetitive DNA content