Automated design of genomic Southern blot probes
Mike DR Croning, David G Fricker, Noboru H Komiyama and Seth GN Grant
Design Case - ProbeDesign56 - back to list
Summary
./analyse_probe_search_results : Thu Sep 29 17:21:25 2005
Connected to host: host, as user: user Database : southern_blot_designs Fetched probe design: ProbeDesign56 assembly : NCBIM34 bias : 5prime chromosome : 11 id : 43 strand : 1 ------------- Design window length: 3501bp All jobs for probe design are successful - total: 56 Fetched conf : Exonerate mouse_NCBIM34 (id: 1) Genome file(s) at: /blastdb/Mouse/NCBIM34/softmasked_dusted Fetched 1114 putative probes to analyse Selection criteria to rank probes: Minimum score ratio : 10 (i.e. self-hit must score at least 10 times higher than the next best hit) Maximum percent repetitive bases: 5 Favour probes to the 5prime end of design window ------------------------ Putative probes without hits : 0 Putative probes with single_self_hit : 1114/1114 Putative probes exceeding selection criteria: 270/1114 PASSED (GREEN) AND FAILED PUTATIVE PROBES IN THE DESIGN WINDOW --------------------------------------------------------------
Image
Unique (yellow), passed (green) and failed putative probes in the design window
Unique putative probes
No probes
Putative probes
Putative probe ID | Length | Score ratio | Actual | %rep DNA | Distance | Overall |
---|---|---|---|---|---|---|
45034 | 1300 | 40.9 | 6500 | 0.7 | 1560 | 39.5 |
45035 | 1300 | 40.9 | 6500 | 0.7 | 1625 | 39.5 |
45036 | 1300 | 40.9 | 6500 | 0.7 | 1690 | 39.5 |
45070 | 1250 | 39.3 | 6250 | 0.7 | 1612 | 37.9 |
45111 | 1200 | 37.7 | 6000 | 0.8 | 1800 | 36.2 |
45037 | 1300 | 38.2 | 6500 | 1.7 | 1755 | 34.9 |
45038 | 1300 | 35.5 | 6500 | 1.7 | 1820 | 32.1 |
45039 | 1300 | 35.5 | 6500 | 1.7 | 1885 | 32.1 |
45040 | 1300 | 35.5 | 6500 | 2.5 | 1950 | 30.6 |
45041 | 1300 | 35.5 | 6500 | 2.5 | 2015 | 30.6 |
45042 | 1300 | 35.5 | 6500 | 2.5 | 2080 | 30.6 |
45043 | 1300 | 35.5 | 6500 | 2.5 | 2145 | 30.6 |
45294 | 1000 | 31.4 | 5000 | 0.9 | 2000 | 29.6 |
45080 | 1250 | 34.2 | 6250 | 2.6 | 2232 | 29.0 |
45156 | 1150 | 31.4 | 5750 | 1.9 | 2052 | 27.6 |
45200 | 1100 | 30.1 | 5500 | 2.0 | 2090 | 26.1 |
45161 | 1150 | 31.4 | 5750 | 2.8 | 2337 | 25.9 |
45407 | 900 | 28.3 | 4500 | 1.7 | 2115 | 25.0 |
45469 | 850 | 26.7 | 4250 | 1.1 | 2142 | 24.6 |
45298 | 1000 | 27.3 | 5000 | 2.2 | 2200 | 22.9 |
45537 | 800 | 25.2 | 4000 | 1.1 | 2200 | 22.9 |
45253 | 1050 | 28.7 | 5250 | 3.0 | 2444 | 22.6 |
45353 | 950 | 26.0 | 4750 | 2.3 | 2256 | 21.3 |
45611 | 750 | 23.6 | 3750 | 1.2 | 2257 | 21.2 |
45304 | 1000 | 27.3 | 5000 | 3.2 | 2500 | 20.9 |
45411 | 900 | 24.6 | 4500 | 2.4 | 2295 | 19.7 |
45691 | 700 | 22.0 | 3500 | 1.4 | 2310 | 19.2 |
45876 | 600 | 18.9 | 3000 | 1.5 | 2400 | 15.9 |
45984 | 550 | 17.3 | 2750 | 1.6 | 2457 | 14.0 |
Overall score = score_ratio - 2 * repetitive DNA content
Redundant probes
Putative probe ID | Length | Score ratio | Actual | %rep DNA | Distance | Overall |
---|---|---|---|---|---|---|
45071 | 1250 | 39.3 | 6250 | 0.7 | 1674 | 37.9 |
45072 | 1250 | 39.3 | 6250 | 0.7 | 1736 | 37.9 |
45109 | 1200 | 37.7 | 6000 | 0.8 | 1680 | 36.2 |
45110 | 1200 | 37.7 | 6000 | 0.8 | 1740 | 36.2 |
45150 | 1150 | 36.2 | 5750 | 0.8 | 1710 | 34.6 |
45151 | 1150 | 36.2 | 5750 | 0.8 | 1767 | 34.6 |
45152 | 1150 | 36.2 | 5750 | 0.8 | 1824 | 34.6 |
45073 | 1250 | 36.8 | 6250 | 1.8 | 1798 | 33.2 |
45194 | 1100 | 34.6 | 5500 | 0.8 | 1760 | 33.0 |
45195 | 1100 | 34.6 | 5500 | 0.8 | 1815 | 33.0 |
45196 | 1100 | 34.6 | 5500 | 0.8 | 1870 | 33.0 |
45241 | 1050 | 33.0 | 5250 | 0.9 | 1820 | 31.3 |
45242 | 1050 | 33.0 | 5250 | 0.9 | 1872 | 31.3 |
45243 | 1050 | 33.0 | 5250 | 0.9 | 1924 | 31.3 |
45153 | 1150 | 34.8 | 5750 | 1.9 | 1881 | 31.0 |
45112 | 1200 | 34.7 | 6000 | 1.8 | 1860 | 31.0 |
45074 | 1250 | 34.2 | 6250 | 1.8 | 1860 | 30.6 |
45075 | 1250 | 34.2 | 6250 | 1.8 | 1922 | 30.6 |
45292 | 1000 | 31.4 | 5000 | 0.9 | 1900 | 29.6 |
45293 | 1000 | 31.4 | 5000 | 0.9 | 1950 | 29.6 |
45197 | 1100 | 33.3 | 5500 | 2.0 | 1925 | 29.3 |
45113 | 1200 | 32.8 | 6000 | 1.8 | 1920 | 29.1 |
45114 | 1200 | 32.8 | 6000 | 1.8 | 1980 | 29.1 |
45076 | 1250 | 34.2 | 6250 | 2.6 | 1984 | 29.0 |
45077 | 1250 | 34.2 | 6250 | 2.6 | 2046 | 29.0 |
45078 | 1250 | 34.2 | 6250 | 2.6 | 2108 | 29.0 |
45079 | 1250 | 34.2 | 6250 | 2.6 | 2170 | 29.0 |
45346 | 950 | 29.9 | 4750 | 0.9 | 1927 | 28.0 |
45347 | 950 | 29.9 | 4750 | 0.9 | 1974 | 28.0 |
45348 | 950 | 29.9 | 4750 | 0.9 | 2021 | 28.0 |
45244 | 1050 | 31.8 | 5250 | 2.1 | 1976 | 27.6 |
45154 | 1150 | 31.4 | 5750 | 1.9 | 1938 | 27.6 |
45155 | 1150 | 31.4 | 5750 | 1.9 | 1995 | 27.6 |
45115 | 1200 | 32.8 | 6000 | 2.7 | 2040 | 27.5 |
45116 | 1200 | 32.8 | 6000 | 2.7 | 2100 | 27.5 |
45117 | 1200 | 32.8 | 6000 | 2.7 | 2160 | 27.5 |
45118 | 1200 | 32.8 | 6000 | 2.7 | 2220 | 27.5 |
45119 | 1200 | 32.8 | 6000 | 2.7 | 2280 | 27.5 |
45404 | 900 | 28.3 | 4500 | 1.0 | 1980 | 26.3 |
45405 | 900 | 28.3 | 4500 | 1.0 | 2025 | 26.3 |
45406 | 900 | 28.3 | 4500 | 1.0 | 2070 | 26.3 |
45349 | 950 | 29.9 | 4750 | 1.9 | 2068 | 26.1 |
45198 | 1100 | 30.1 | 5500 | 2.0 | 1980 | 26.1 |
45199 | 1100 | 30.1 | 5500 | 2.0 | 2035 | 26.1 |
45157 | 1150 | 31.4 | 5750 | 2.8 | 2109 | 25.9 |
45158 | 1150 | 31.4 | 5750 | 2.8 | 2166 | 25.9 |
45159 | 1150 | 31.4 | 5750 | 2.8 | 2223 | 25.9 |
45160 | 1150 | 31.4 | 5750 | 2.8 | 2280 | 25.9 |
45295 | 1000 | 29.4 | 5000 | 2.2 | 2050 | 25.0 |
45466 | 850 | 26.7 | 4250 | 1.1 | 2016 | 24.6 |
45467 | 850 | 26.7 | 4250 | 1.1 | 2058 | 24.6 |
45468 | 850 | 26.7 | 4250 | 1.1 | 2100 | 24.6 |
45245 | 1050 | 28.7 | 5250 | 2.1 | 2028 | 24.5 |
45246 | 1050 | 28.7 | 5250 | 2.1 | 2080 | 24.5 |
45247 | 1050 | 28.7 | 5250 | 2.1 | 2132 | 24.5 |
45201 | 1100 | 30.1 | 5500 | 2.9 | 2145 | 24.2 |
45202 | 1100 | 30.1 | 5500 | 2.9 | 2200 | 24.2 |
45203 | 1100 | 30.1 | 5500 | 2.9 | 2255 | 24.2 |
45204 | 1100 | 30.1 | 5500 | 2.9 | 2310 | 24.2 |
45205 | 1100 | 30.1 | 5500 | 2.9 | 2365 | 24.2 |
45296 | 1000 | 27.3 | 5000 | 2.2 | 2100 | 22.9 |
45297 | 1000 | 27.3 | 5000 | 2.2 | 2150 | 22.9 |
45534 | 800 | 25.2 | 4000 | 1.1 | 2080 | 22.9 |
45535 | 800 | 25.2 | 4000 | 1.1 | 2120 | 22.9 |
45536 | 800 | 25.2 | 4000 | 1.1 | 2160 | 22.9 |
45248 | 1050 | 28.7 | 5250 | 3.0 | 2184 | 22.6 |
45249 | 1050 | 28.7 | 5250 | 3.0 | 2236 | 22.6 |
45250 | 1050 | 28.7 | 5250 | 3.0 | 2288 | 22.6 |
45251 | 1050 | 28.7 | 5250 | 3.0 | 2340 | 22.6 |
45252 | 1050 | 28.7 | 5250 | 3.0 | 2392 | 22.6 |
45350 | 950 | 26.0 | 4750 | 2.3 | 2115 | 21.3 |
45351 | 950 | 26.0 | 4750 | 2.3 | 2162 | 21.3 |
45352 | 950 | 26.0 | 4750 | 2.3 | 2209 | 21.3 |
45607 | 750 | 23.6 | 3750 | 1.2 | 2109 | 21.2 |
45608 | 750 | 23.6 | 3750 | 1.2 | 2146 | 21.2 |
45609 | 750 | 23.6 | 3750 | 1.2 | 2183 | 21.2 |
45610 | 750 | 23.6 | 3750 | 1.2 | 2220 | 21.2 |
45408 | 900 | 26.0 | 4500 | 2.4 | 2160 | 21.1 |
45299 | 1000 | 27.3 | 5000 | 3.2 | 2250 | 20.9 |
45300 | 1000 | 27.3 | 5000 | 3.2 | 2300 | 20.9 |
45301 | 1000 | 27.3 | 5000 | 3.2 | 2350 | 20.9 |
45302 | 1000 | 27.3 | 5000 | 3.2 | 2400 | 20.9 |
45303 | 1000 | 27.3 | 5000 | 3.2 | 2450 | 20.9 |
45470 | 850 | 25.8 | 4250 | 2.6 | 2184 | 20.6 |
45409 | 900 | 24.6 | 4500 | 2.4 | 2205 | 19.7 |
45410 | 900 | 24.6 | 4500 | 2.4 | 2250 | 19.7 |
45687 | 700 | 22.0 | 3500 | 1.3 | 2170 | 19.4 |
45688 | 700 | 22.0 | 3500 | 1.3 | 2205 | 19.4 |
45689 | 700 | 22.0 | 3500 | 1.3 | 2240 | 19.4 |
45690 | 700 | 22.0 | 3500 | 1.3 | 2275 | 19.4 |
45354 | 950 | 26.0 | 4750 | 3.4 | 2303 | 19.2 |
45355 | 950 | 26.0 | 4750 | 3.4 | 2350 | 19.2 |
45356 | 950 | 26.0 | 4750 | 3.4 | 2397 | 19.2 |
45357 | 950 | 26.0 | 4750 | 3.4 | 2444 | 19.2 |
45358 | 950 | 26.0 | 4750 | 3.4 | 2491 | 19.2 |
45359 | 950 | 26.0 | 4750 | 3.4 | 2538 | 19.2 |
45538 | 800 | 24.1 | 4000 | 2.8 | 2240 | 18.6 |
45471 | 850 | 23.2 | 4250 | 2.6 | 2226 | 18.0 |
45472 | 850 | 23.2 | 4250 | 2.6 | 2268 | 18.0 |
45473 | 850 | 23.2 | 4250 | 2.6 | 2310 | 18.0 |
45474 | 850 | 23.2 | 4250 | 2.6 | 2352 | 18.0 |
45775 | 650 | 20.4 | 3250 | 1.4 | 2208 | 17.7 |
45776 | 650 | 20.4 | 3250 | 1.4 | 2240 | 17.7 |
45777 | 650 | 20.4 | 3250 | 1.4 | 2272 | 17.7 |
45778 | 650 | 20.4 | 3250 | 1.4 | 2304 | 17.7 |
45779 | 650 | 20.4 | 3250 | 1.4 | 2336 | 17.7 |
45412 | 900 | 24.6 | 4500 | 3.6 | 2340 | 17.5 |
45413 | 900 | 24.6 | 4500 | 3.6 | 2385 | 17.5 |
45414 | 900 | 24.6 | 4500 | 3.6 | 2430 | 17.5 |
45415 | 900 | 24.6 | 4500 | 3.6 | 2475 | 17.5 |
45416 | 900 | 24.6 | 4500 | 3.6 | 2520 | 17.5 |
45417 | 900 | 24.6 | 4500 | 3.6 | 2565 | 17.5 |
45539 | 800 | 21.9 | 4000 | 2.8 | 2280 | 16.4 |
45540 | 800 | 21.9 | 4000 | 2.8 | 2320 | 16.4 |
45541 | 800 | 21.9 | 4000 | 2.8 | 2360 | 16.4 |
45542 | 800 | 21.9 | 4000 | 2.8 | 2400 | 16.4 |
45612 | 750 | 22.1 | 3750 | 2.9 | 2294 | 16.2 |
45549 | 800 | 21.9 | 4000 | 2.9 | 2680 | 16.1 |
45872 | 600 | 18.9 | 3000 | 1.5 | 2280 | 15.9 |
45873 | 600 | 18.9 | 3000 | 1.5 | 2310 | 15.9 |
45874 | 600 | 18.9 | 3000 | 1.5 | 2340 | 15.9 |
45875 | 600 | 18.9 | 3000 | 1.5 | 2370 | 15.9 |
45475 | 850 | 23.2 | 4250 | 3.8 | 2394 | 15.7 |
45476 | 850 | 23.2 | 4250 | 3.8 | 2436 | 15.7 |
45477 | 850 | 23.2 | 4250 | 3.8 | 2478 | 15.7 |
45478 | 850 | 23.2 | 4250 | 3.8 | 2520 | 15.7 |
45479 | 850 | 23.2 | 4250 | 3.8 | 2562 | 15.7 |
45480 | 850 | 23.2 | 4250 | 3.8 | 2604 | 15.7 |
45481 | 850 | 23.2 | 4250 | 3.8 | 2646 | 15.7 |
45780 | 650 | 20.4 | 3250 | 2.8 | 2368 | 14.9 |
45613 | 750 | 20.5 | 3750 | 2.9 | 2331 | 14.6 |
45614 | 750 | 20.5 | 3750 | 2.9 | 2368 | 14.6 |
45615 | 750 | 20.5 | 3750 | 2.9 | 2405 | 14.6 |
45616 | 750 | 20.5 | 3750 | 2.9 | 2442 | 14.6 |
45623 | 750 | 20.5 | 3750 | 3.1 | 2701 | 14.4 |
45624 | 750 | 20.5 | 3750 | 3.1 | 2738 | 14.4 |
45692 | 700 | 20.6 | 3500 | 3.1 | 2345 | 14.3 |
45979 | 550 | 17.3 | 2750 | 1.6 | 2322 | 14.0 |
45980 | 550 | 17.3 | 2750 | 1.6 | 2349 | 14.0 |
45981 | 550 | 17.3 | 2750 | 1.6 | 2376 | 14.0 |
45982 | 550 | 17.3 | 2750 | 1.6 | 2403 | 14.0 |
45983 | 550 | 17.3 | 2750 | 1.6 | 2430 | 14.0 |
45543 | 800 | 21.9 | 4000 | 4.0 | 2440 | 13.9 |
45544 | 800 | 21.9 | 4000 | 4.0 | 2480 | 13.9 |
45545 | 800 | 21.9 | 4000 | 4.0 | 2520 | 13.9 |
45546 | 800 | 21.9 | 4000 | 4.0 | 2560 | 13.9 |
45547 | 800 | 21.9 | 4000 | 4.0 | 2600 | 13.9 |
45548 | 800 | 21.9 | 4000 | 4.0 | 2640 | 13.9 |
45693 | 700 | 19.1 | 3500 | 3.1 | 2380 | 12.8 |
45694 | 700 | 19.1 | 3500 | 3.1 | 2415 | 12.8 |
45695 | 700 | 19.1 | 3500 | 3.1 | 2450 | 12.8 |
45696 | 700 | 19.1 | 3500 | 3.1 | 2485 | 12.8 |
45702 | 700 | 19.1 | 3500 | 3.3 | 2695 | 12.6 |
45703 | 700 | 19.1 | 3500 | 3.3 | 2730 | 12.6 |
45704 | 700 | 19.1 | 3500 | 3.3 | 2765 | 12.6 |
45705 | 700 | 19.1 | 3500 | 3.3 | 2800 | 12.6 |
45781 | 650 | 19.1 | 3250 | 3.4 | 2400 | 12.3 |
46098 | 500 | 15.7 | 2500 | 1.8 | 2375 | 12.1 |
46099 | 500 | 15.7 | 2500 | 1.8 | 2400 | 12.1 |
46100 | 500 | 15.7 | 2500 | 1.8 | 2425 | 12.1 |
46101 | 500 | 15.7 | 2500 | 1.8 | 2450 | 12.1 |
46102 | 500 | 15.7 | 2500 | 1.8 | 2475 | 12.1 |
46103 | 500 | 15.7 | 2500 | 1.8 | 2500 | 12.1 |
45697 | 700 | 19.1 | 3500 | 3.6 | 2520 | 12.0 |
45617 | 750 | 20.5 | 3750 | 4.3 | 2479 | 12.0 |
45618 | 750 | 20.5 | 3750 | 4.3 | 2516 | 12.0 |
45619 | 750 | 20.5 | 3750 | 4.3 | 2553 | 12.0 |
45620 | 750 | 20.5 | 3750 | 4.3 | 2590 | 12.0 |
45621 | 750 | 20.5 | 3750 | 4.3 | 2627 | 12.0 |
45622 | 750 | 20.5 | 3750 | 4.3 | 2664 | 12.0 |
45782 | 650 | 17.8 | 3250 | 3.4 | 2432 | 11.0 |
45783 | 650 | 17.8 | 3250 | 3.4 | 2464 | 11.0 |
45784 | 650 | 17.8 | 3250 | 3.4 | 2496 | 11.0 |
45785 | 650 | 17.8 | 3250 | 3.4 | 2528 | 11.0 |
45786 | 650 | 17.8 | 3250 | 3.4 | 2560 | 11.0 |
45877 | 600 | 18.2 | 3000 | 3.7 | 2430 | 10.8 |
45790 | 650 | 17.8 | 3250 | 3.5 | 2688 | 10.7 |
45791 | 650 | 17.8 | 3250 | 3.5 | 2720 | 10.7 |
45792 | 650 | 17.8 | 3250 | 3.5 | 2752 | 10.7 |
45793 | 650 | 17.8 | 3250 | 3.5 | 2784 | 10.7 |
45794 | 650 | 17.8 | 3250 | 3.5 | 2816 | 10.7 |
45795 | 650 | 17.8 | 3250 | 3.5 | 2848 | 10.7 |
45878 | 600 | 17.3 | 3000 | 3.7 | 2460 | 10.0 |
45698 | 700 | 19.1 | 3500 | 4.6 | 2555 | 10.0 |
45699 | 700 | 19.1 | 3500 | 4.6 | 2590 | 10.0 |
45700 | 700 | 19.1 | 3500 | 4.6 | 2625 | 10.0 |
45701 | 700 | 19.1 | 3500 | 4.6 | 2660 | 10.0 |
45879 | 600 | 16.4 | 3000 | 3.7 | 2490 | 9.1 |
45880 | 600 | 16.4 | 3000 | 3.7 | 2520 | 9.1 |
45881 | 600 | 16.4 | 3000 | 3.7 | 2550 | 9.1 |
45882 | 600 | 16.4 | 3000 | 3.7 | 2580 | 9.1 |
45883 | 600 | 16.4 | 3000 | 3.7 | 2610 | 9.1 |
45886 | 600 | 16.4 | 3000 | 3.8 | 2700 | 8.7 |
45887 | 600 | 16.4 | 3000 | 3.8 | 2730 | 8.7 |
45888 | 600 | 16.4 | 3000 | 3.8 | 2760 | 8.7 |
45889 | 600 | 16.4 | 3000 | 3.8 | 2790 | 8.7 |
45890 | 600 | 16.4 | 3000 | 3.8 | 2820 | 8.7 |
45891 | 600 | 16.4 | 3000 | 3.8 | 2850 | 8.7 |
45892 | 600 | 16.4 | 3000 | 3.8 | 2880 | 8.7 |
45985 | 550 | 16.7 | 2750 | 4.0 | 2484 | 8.7 |
46110 | 500 | 13.7 | 2500 | 2.6 | 2675 | 8.5 |
46111 | 500 | 13.7 | 2500 | 2.6 | 2700 | 8.5 |
45787 | 650 | 17.8 | 3250 | 4.9 | 2592 | 7.9 |
45788 | 650 | 17.8 | 3250 | 4.9 | 2624 | 7.9 |
45789 | 650 | 17.8 | 3250 | 4.9 | 2656 | 7.9 |
45986 | 550 | 15.4 | 2750 | 4.0 | 2511 | 7.4 |
45992 | 550 | 15.0 | 2750 | 3.8 | 2673 | 7.4 |
45885 | 600 | 16.4 | 3000 | 4.7 | 2670 | 7.1 |
45987 | 550 | 15.0 | 2750 | 4.0 | 2538 | 7.0 |
45988 | 550 | 15.0 | 2750 | 4.0 | 2565 | 7.0 |
45989 | 550 | 15.0 | 2750 | 4.0 | 2592 | 7.0 |
45990 | 550 | 15.0 | 2750 | 4.0 | 2619 | 7.0 |
45991 | 550 | 15.0 | 2750 | 4.0 | 2646 | 7.0 |
45993 | 550 | 15.0 | 2750 | 4.2 | 2700 | 6.7 |
45994 | 550 | 15.0 | 2750 | 4.2 | 2727 | 6.7 |
45995 | 550 | 15.0 | 2750 | 4.2 | 2754 | 6.7 |
45996 | 550 | 15.0 | 2750 | 4.2 | 2781 | 6.7 |
45997 | 550 | 15.0 | 2750 | 4.2 | 2808 | 6.7 |
45998 | 550 | 15.0 | 2750 | 4.2 | 2835 | 6.7 |
45999 | 550 | 15.0 | 2750 | 4.2 | 2862 | 6.7 |
46000 | 550 | 15.0 | 2750 | 4.2 | 2889 | 6.7 |
46001 | 550 | 15.0 | 2750 | 4.2 | 2916 | 6.7 |
46002 | 550 | 15.0 | 2750 | 4.2 | 2943 | 6.7 |
46123 | 500 | 15.6 | 2500 | 4.6 | 3000 | 6.4 |
46104 | 500 | 15.2 | 2500 | 4.4 | 2525 | 6.4 |
46105 | 500 | 14.7 | 2500 | 4.4 | 2550 | 5.9 |
46122 | 500 | 14.8 | 2500 | 4.6 | 2975 | 5.6 |
46112 | 500 | 13.7 | 2500 | 4.2 | 2725 | 5.3 |
46106 | 500 | 13.7 | 2500 | 4.4 | 2575 | 4.9 |
46107 | 500 | 13.7 | 2500 | 4.4 | 2600 | 4.9 |
46108 | 500 | 13.7 | 2500 | 4.4 | 2625 | 4.9 |
46109 | 500 | 13.7 | 2500 | 4.4 | 2650 | 4.9 |
46113 | 500 | 13.7 | 2500 | 4.6 | 2750 | 4.5 |
46114 | 500 | 13.7 | 2500 | 4.6 | 2775 | 4.5 |
46115 | 500 | 13.7 | 2500 | 4.6 | 2800 | 4.5 |
46116 | 500 | 13.7 | 2500 | 4.6 | 2825 | 4.5 |
46117 | 500 | 13.7 | 2500 | 4.6 | 2850 | 4.5 |
46118 | 500 | 13.7 | 2500 | 4.6 | 2875 | 4.5 |
46119 | 500 | 13.7 | 2500 | 4.6 | 2900 | 4.5 |
46120 | 500 | 13.7 | 2500 | 4.6 | 2925 | 4.5 |
46121 | 500 | 13.7 | 2500 | 4.6 | 2950 | 4.5 |
Overall score = score_ratio - 2 * repetitive DNA content